Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
major facilitator superfamily (MFS) antibiotic efflux pump
Overview
| Allele | Database | Papers | Drug Classes | Organisms | Countries | Years | Sequence Accession | Protein Accession |
|---|---|---|---|---|---|---|---|---|
| tet(G) | Card DatabaseResFinder Database | 2 | TETRACYCLINE, DOXYCYCLINE | Pseudomonas sp. | - | 1999 | AF133139.1 | AAD25538.1 |
| Tet(G) | Card DatabaseReference Gene CatalogReslit | 49 | tetracycline, TETRACYCLINE +4 | Salmonella enterica serovar Typhimurium DT104 +31 | Asia|United States, Canada|France|Belgium|Scotland, United States, France|Belgium|Scotland|Canada, North Carolina|Ohio, Hungary, Brazil|China|Hong Kong|Indonesia|Israel|Nigeria|Peru|Singapore|Thailand|Vietnam, Australia|India, Thailand|Japan, Greece, H1 Hospital, USA|Peru|Egypt|Cambodia|Kenya, Europe, China, Sicily|Italy, South Africa, Guangdong, Saudi Arabia, France, Nigeria, Bangladesh, Pakistan|China|United States|United Kingdom|Canada|Australia|Spain|Denmark|UAE|Ethiopia|India|South Asia, Uruguay, Egypt, Africa, Lebanon | 1992, 2000, 2001, 2002, 2003, 2004, 2005, 2012, 2013, 2014, 2016, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025 | AF261825 | BAC67151.1 |
| tetG | Reslit | 34 | tetracycline, oxytetracycline +2 | Salmonella enterica serovar Typhimurium +22 | Czech Republic, Japan, India|Mexico|Egypt|Morocco|Peru|Kenya|Senegal|Mali|South Africa|Vietnam|Nepal|Indonesia|Bolivia|Equatorial Guinea|Uganda|Cameroon|Guatemala|Philippines|Burkina-Faso, Taiwan, Korea, Germany, China, United States, North China, Changsha, South America|South Korea, UK, Tuscany, West Cameroon, Nigeria, Kenya, Russia|Moscow, Georgia, USA|Georgia, Europe|USA|Portugal|Germany|Australia|China|India|Pakistan|Sweden|Colorado, Egypt, Brazil, Israel, Vietnam | 2003, 2004, 2006, 2011, 2012, 2013, 2014, 2016, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025 | AY171244 | - |
| TetG | Reslit | 1 | tetracycline | Pseudomonas aeruginosa | India | 2015 | JAAO00000000.1 | - |
| tet (G) | Reslit | 2 | tetracycline | Gram negative bacteria +1 | Europe | 2017, 2022 | - | - |
| TETG-01 | Reslit | 1 | tetracycline | - | - | 2021 | PRJNA705824 | - |
| TETG-02 | Reslit | 1 | tetracycline | - | - | 2021 | PRJNA705824 | - |
| tet G | Reslit | 4 | tetracycline | Escherichia coli +3 | Europe, Eastern Cape province, South Africa|South Africa, north-central Nigeria, South Africa | 2021, 2022, 2023, 2024 | NCBI:GCA_017292115.1|NCBI:CP075176.1|NCBI:GCA_009791355.1|NCBI:GCA_003725635.1|NCBI:CP054917.1|NCBI:CP041945.1|NCBI:GCA_003954525.1|NCBI:GCA_003954355.1|NCBI:GCA_002411915.1|NCBI:CP041774.1|NCBI:GCA_000796095.1|NCBI:GCA_000790805.1|NCBI:GCA_000791735.1|NCBI:LR134330.1|NCBI:GCA_003585175.1|NCBI:GCA_003836135.1|NCBI:GCA_017693745.1|NCBI:GCA_017693755.1|NCBI:GCA_017693465.1 | - |
Distribution of tetracycline resistance genes and transposons among phylloplane bacteria in Michigan apple orchards., Nucleotide sequence analysis of the class G tetracycline resistance determinant from Vibrio anguillarum.
Changes in antimicrobial resistance in Salmonella enterica serovar typhimurium.
The study identifies the chloramphenicol resistance gene floR and the tetracycline resistance gene tet(G) in Salmonella enterica serovar Typhimurium DT104, suggesting their origin in aquatic bacteria and horizontal transfer.
Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar Agona.
The study characterizes the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104, identifying genes such as aadA2, floR, qacE delta1, sulI delta1, and tet(G) that confer resistance to various antibiotics.
Development, validation, and application of PCR primers for detection of tetracycline efflux genes of gram-negative bacteria.
The study developed and validated PCR primers for detecting tetracycline efflux genes in gram-negative bacteria, identifying multiple tet genes in swine feed, feces, and groundwater, highlighting the spread of tetracycline resistance in agricultural environments.
Evolution of antibiotic resistance in Salmonella enterica serovar typhimurium strains isolated in the Czech Republic between 1984 and 2002.
The study identifies the aadA21 gene, a novel variant of the aadA gene, and other resistance genes such as blaPSE-1, floR, sul1, and tetG in Salmonella enterica serovar Typhimurium strains from the Czech Republic between 1984 and 2002.
Similarity of tetracycline resistance genes isolated from fish farm bacteria to those from clinical isolates.
The study identified tetracycline resistance genes (tetB, tetC, tetD, tetY, and tetG) in fish farm bacteria that are similar to those found in clinical isolates, indicating a shared origin of these resistance genes.
Similarity of tetracycline resistance genes isolated from fish farm bacteria to those from clinical isolates.
Nucleotide sequence analysis of the class G tetracycline resistance determinant from Vibrio anguillarum.
AcrAB-TolC Directs Efflux-Mediated Multidrug Resistance in Salmonella enterica Serovar Typhimurium DT104.
The study identifies AcrAB-TolC as a critical efflux system responsible for multidrug resistance in Salmonella enterica serovar Typhimurium DT104, along with the roles of floR and tet(G) in resistance to chloramphenicol-florfenicol and tetracyclines, respectively.
Mechanism of resistance to several antimicrobial agents in Salmonella Clinical isolates causing traveler's diarrhea.
The study identified several AMR genes and mutations in Salmonella isolates causing traveler's diarrhea, including blaTEM, blaOXA-1, tetA, tetB, tetG, dfrA1, dfrA12, dfrA14, dfrA17, floR, cmlA, and a mutation in the gyrA gene. These genes and mutations contribute to resistance against ampicillin, tetracycline, trimethoprim, chloramphenicol, and quinolones.
Update on acquired tetracycline resistance genes.
Update on acquired tetracycline resistance genes.
Development and Application of Real-Time PCR Assays for Quantification of Genes Encoding Tetracycline Resistance
The study developed and validated real-time PCR assays to quantify ten major classes of tetracycline resistance genes (tet) in microbiome samples, revealing significant differences in tet gene abundance between bovine and swine manures, with swine manures showing higher levels. Composting significantly reduced tet gene abundance.
Detection of multidrug-resistant Salmonella enterica serovar typhimurium phage types DT102, DT104, and U302 by multiplex PCR.
The study identifies multiple AMR genes associated with multidrug-resistant Salmonella enterica serovar Typhimurium phage types DT104, DT102, and U302, including pse, floR, str, sulI, tetG, and spvC.
Antimicrobial resistance, virulence-associated genes, and pulsed-field gel electrophoresis profiles of Salmonella enterica subsp. enterica serovar Typhimurium isolated from piglets with diarrhea in Korea.
The study identified multiple antimicrobial resistance genes in Salmonella enterica subsp. enterica serovar Typhimurium isolates from piglets with diarrhea in Korea, including bla PSE, bla TEM, cat1, cat2, floR, strA, strB, aadA, sulI, sulII, tetA, tetC, and tetG.
Stability, entrapment and variant formation of Salmonella genomic island 1.
The study identifies and characterizes several AMR genes within the Salmonella genomic island 1 (SGI1), including aadA2, blaPSE-1, floR, qacEΔ1sulΔ1, qacEΔ1sul1, and tet(G). These genes confer resistance to various antibiotics such as streptomycin, spectinomycin, ampicillin, chloramphenicol, florfenicol, sulfonamides, and tetracycline.
Development and Evaluation of a Microarray-Based Serogenotyping Assay for Salmonella
The study presents a microarray-based serogenotyping assay for Salmonella, demonstrating high correlation between genotypic and phenotypic characteristics. Several AMR genes were identified and validated, showing strong association with AMR phenotypes.
DNA microarray for genotyping antibiotic resistance determinants in Acinetobacter baumannii clinical isolates.
The study developed a DNA microarray for genotyping antibiotic resistance determinants in Acinetobacter baumannii clinical isolates, identifying numerous resistance genes and mutations associated with carbapenem, aminoglycoside, fluoroquinolone, and other antibiotic resistances.
Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production.
A comprehensive insight into tetracycline resistant bacteria and antibiotic resistance genes in activated sludge using next-generation sequencing.
The study identifies several tetracycline resistance genes (tetA, tetC, and tetG) in activated sludge exposed to tetracycline, highlighting their increased abundance and diversity under tetracycline stress. It also reveals the presence of novel tetracycline-resistant bacteria genera.
Extensively drug-resistant pseudomonas aeruginosa isolates containing blaVIM-2 and elements of Salmonella genomic island 2: a new genetic resistance determinant in Northeast Ohio.
Characterization of microbiota composition and presence of selected antibiotic resistance genes in carriage water of ornamental fish.
The study identified several antibiotic resistance genes including sul1, tet(A), strA, aadA, cat, tet(G), and sul2 in the microbiota of ornamental fish carriage water. These genes were found to be prevalent and associated with various bacterial families.
Draft genome sequence of blaVeb-1, blaoxa-10 producing multi-drug resistant (MDR) Pseudomonas aeruginosa strain VRFPA09 recovered from bloodstream infection.
The study reports the draft genome sequence of MDR Pseudomonas aeruginosa strain VRFPA09, identifying several AMR genes including blaVeb-1, blaOXA-10, aadA1, aph(3')Iib, Sul1, CatB7, TetG, dfrB5, and fosA, which contribute to resistance against various antibiotics.
Survival of Antibiotic Resistant Bacteria and Horizontal Gene Transfer Control Antibiotic Resistance Gene Content in Anaerobic Digesters.
The study identified tet(G) in Pseudomonas sp. and tet(W) in Bacillus sp. as tetracycline resistance genes, highlighting their persistence in anaerobic digesters and the impact of raw sludge on antibiotic resistance gene content.
Whole-Genome Sequencing for Detecting Antimicrobial Resistance in Nontyphoidal Salmonella.
The study identified 65 unique resistance genes in nontyphoidal Salmonella, including bla CTX-M1 and bla SHV2a, which were first reported in retail meat isolates in the United States. The research highlights the effectiveness of whole-genome sequencing in detecting antimicrobial resistance genes and correlating them with phenotypic resistance.
Peracetic acid disinfection kinetics for combined sewer overflows: indicator organisms, antibiotic resistance genes, and microbial community.
The study evaluated the efficacy of peracetic acid (PAA) in reducing antibiotic resistance genes (ARGs) and indicator organisms in simulated combined sewer overflow (CSO) effluent. It identified that PAA effectively reduced the concentrations of sul 1, tet (G), and BacHum in viable cells, with varying degrees of effectiveness depending on the PAA dosage and contact time.
Antibiotic residues in liquid manure from swine feedlot and their effects on nearby groundwater in regions of North China.
The study identified antibiotic resistance genes (ARGs) such as qnrA, sulI, sulII, tetG, tetM, tetO, and intI1 in liquid manure from swine feedlots and their effects on nearby groundwater. These genes were found to be associated with fluoroquinolone, sulfonamide, and tetracycline resistance.
Comparative genomics of clinical strains of Pseudomonas aeruginosa strains isolated from different geographic sites.
The study identified several AMR genes in Pseudomonas aeruginosa strains from different geographic locations, including beta-lactamases, aminoglycoside resistance genes, fosfomycin resistance, chloramphenicol resistance, sulfonamide resistance, quaternary ammonium compound resistance, tetracycline resistance, and others. Indian eye isolates exhibited a higher diversity of resistance genes compared to Australian isolates.
Genotypic and phenotypic characterization of Salmonella enterica subsp. enterica serovar Typhimurium monophasic variants isolated in Thailand and Japan.
The study identified several antimicrobial resistance genes in Salmonella enterica subsp. enterica serovar Typhimurium monophasic variants, including blaTEM, aadA, strA, strB, tet(A), tet(B), tet(G), sul1, sul2, sul3, and floR, which confer resistance to ampicillin, streptomycin, oxytetracycline, sulfisoxazole, and chloramphenicol.
Applying Rapid Whole-Genome Sequencing To Predict Phenotypic Antimicrobial Susceptibility Testing Results among Carbapenem-Resistant Klebsiella pneumoniae Clinical Isolates.
The study identified various AMR genes and mutations in carbapenem-resistant Klebsiella pneumoniae isolates, including bla KPC-2, bla KPC-3, bla NDM-1, bla OXA-48, ampC, qnrB, qnrS, aac(6')-Ib-cr, armA, rmtB, tet(A), tet(B), tet(D), tet(G), sul1, sul2, sul3, dfrA1, dfrA12, dfrA14, dfrA25, dfrA26, dfrA30, oqxA, oqxB, and mgrB, as well as mutations in ompK35, ompK36, gyrA, parC, phoP, phoQ, pmrA, and pmrB, which contribute to resistance against multiple antibiotics.
Chlortetracycline Enhances Tonsil Colonization and Fecal Shedding of Multidrug-Resistant Salmonella enterica Serovar Typhimurium DT104 without Major Alterations to the Porcine Tonsillar and Intestinal Microbiota.
The study identifies the tet(G) gene as a mediator of chlortetracycline resistance in multidrug-resistant Salmonella enterica serovar Typhimurium DT104, demonstrating its role in enhancing tonsil colonization and fecal shedding.
Whole Genome Sequencing and Comparative Genomics Analyses of Pandoraea sp. XY-2, a New Species Capable of Biodegrade Tetracycline.
The study identifies two tetracycline resistance genes, tetR and tetG, in Pandoraea sp. XY-2, suggesting its capability to biodegrade tetracycline.
Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus.
The study found that oral administration of florfenicol increased the abundance and diversity of antibiotic resistance genes (ARGs) and mobile genetic elements (MGEs) in the gut of Piaractus mesopotamicus. Several ARGs, including floR, mexQ, macB, and others, were identified as being associated with multidrug resistance and efflux pump mechanisms.
Determining antimicrobial susceptibility in Salmonella enterica serovar Typhimurium through whole genome sequencing: a comparison against multiple phenotypic susceptibility testing methods.
The study identified various AMR genes and mutations in Salmonella enterica serovar Typhimurium, including aadA, strAB, blaTEM, blaCARB, floR, cmlA1, catA1, qnrB19, sul1, sul2, sul3, dfrA1, dfrA12, dfrA14, tetA, tetB, tetC, tetG, and mutations in gyrA. These genes and mutations were validated through whole genome sequencing and phenotypic ASTs.
Evaluating the genome and resistome of extensively drug-resistant Klebsiella pneumoniae using native DNA and RNA Nanopore sequencing.
The study identified multiple AMR genes in extensively drug-resistant Klebsiella pneumoniae isolates, including beta-lactamases (blaSHV-11, blaTEM-1B, blaVEB-1, blaOXA-10, blaKPC-2, blaOXA-9, blaVIM-27, blaCTX-M-15, blaOXA-1, blaOXA-48), aminoglycoside resistance genes (aadA1, ant(2'')-Ia, aph(6)-Id, arr-2, aadA24, aph(3')-Ia, aph(6)-Id, aac(3)-IIa, aac(6')Ib-cr, aac(6')-Ib, aac(6')-Ib-cr), sulfonamide resistance genes (sul1, sul2), tetracycline resistance genes (tet(A), tet(G)), trimethoprim resistance genes (dfrA1, dfrA14, dfrA23), chloramphenicol resistance genes (cmlA1, catB4), and others.
Genomic Analysis of GC1 Strains from H1 Hospital
The study identifies various AMR genes in GC1 Group 1 and Outgroup Group 3 genomes, including aac(6')-Ib, aph(3')-Ia, aac(3)-IIa, sul1, sul2, tet(A), tet(G), catA1, intI1, intI2, and efflux pumps adeABC, adeIJK, and adeFGH. These genes contribute to multidrug resistance in Acinetobacter baumannii.
Pathotypes and Antimicrobial Susceptibility of Escherichia Coli Isolated from Wild Boar (Sus scrofa) in Tuscany.
The study identified various antimicrobial resistance genes in E. coli isolates from wild boar in Tuscany, including blaCMY-2, sul1, sul2, tetG, aadA1, and strA-strB, indicating significant resistance to beta-lactams, sulfonamides, tetracyclines, and streptomycin.
Antibiotic Resistance Profiles, Molecular Mechanisms and Innovative Treatment Strategies of Acinetobacter baumannii.
The paper discusses the antibiotic resistance profiles and molecular mechanisms of Acinetobacter baumannii, highlighting the presence of various beta-lactamases such as blaOXA-23, blaOXA-51, blaOXA-24/40, blaOXA-58, blaOXA-143, blaOXA-235, blaIMP, blaVIM, and blaNDM, as well as aminoglycoside-modifying enzymes like aac(6')-Ib, aph(3')-Ia, and ant(2'')-Ia. It also identifies efflux pumps such as adeABC and tetracycline resistance genes like tet(A).
Tracking Antimicrobial Resistance Determinants in Diarrheal Pathogens: A Cross-Institutional Pilot Study.
The study identified 55 different antimicrobial resistance determinants in diarrheal pathogens, highlighting the presence of genes conferring resistance to multiple antibiotic classes, including beta-lactams, aminoglycosides, macrolides, tetracyclines, phenicols, sulfonamides, and others. Notably, carbapenemase genes like bla OXA-48 and bla NDM were detected in certain isolates, indicating emerging resistance concerns.
Profiling Virulence and Antimicrobial Resistance Markers of Enterovirulent Escherichia Coli from Fecal Isolates of Adult Patients with Enteric Infections in West Cameroon.
The study identified several AMR genes and mutations in enterovirulent E. coli isolates from adult patients in Cameroon, including blaTEM, blaOxa, cat1, cat2, tetB, tetA, tetG, sul2, and dfrA12, along with mutations in gyrA and parC contributing to quinolone resistance.
The European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2017/2018.
The report highlights the prevalence of antimicrobial resistance in zoonotic and indicator bacteria, focusing on Salmonella, Campylobacter, and E. coli. It notes high resistance levels to ampicillin, sulfonamides, and tetracyclines in Salmonella and E. coli isolates, along with rising resistance to fluoroquinolones in certain serovars. Carbapenemase-producing E. coli and Salmonella were rarely detected.
Comparative Genomic Analysis of 450 Strains of Salmonella enterica Isolated from Diseased Animals.
The study identified 60 antimicrobial resistance genes (ARGs), 4 disinfectant resistance genes (DRGs), and 33 heavy metal resistance genes (HMRGs) in 450 Salmonella strains isolated from diseased animals. These genes contributed to resistance against multiple antimicrobial classes, including aminoglycosides, beta-lactams, tetracyclines, sulfonamides, and phenicols.
Evolution of antibiotic resistance at low antibiotic concentrations including selection below the minimal selective concentration.
The study identifies ermF, intI1, and mphA as genes that show positive selection under specific antibiotic concentrations, highlighting their role in antibiotic resistance development at low concentrations.
Pyrolyzed biowastes deactivated potentially toxic metals and eliminated antibiotic resistant genes for healthy vegetable production.
The study found that pyrolysis of biowastes effectively reduced the abundance of antibiotic resistance genes (ARGs) such as tetracycline resistance genes (tetC, tetG, tetM, tetO, tetW), sulfonamide resistance genes (sul1, sul2), and class 1 integron-integrase gene (intI1) in swine manure and sewage sludge.
Sewer biofilm microbiome and antibiotic resistance genes as function of pipe material, source of microbes, and disinfection: field and laboratory studies.
This study identified various antibiotic resistance genes (ARGs) in sewer biofilms, including sul1, blaTEM, tet(G), tet(O), tet(W), and ermF, which were detected in field and simulated sewer biofilm samples. The research also explored the effects of disinfection protocols on biofilm persistence.
Class 1 integron-borne cassettes harboring blaCARB-2 gene in multidrug-resistant and virulent Salmonella Typhimurium ST19 strains recovered from clinical human stool samples, United States.
The study identifies the presence of the blaCARB-2 gene along with other resistance genes such as aac(6')-Iaa, aadA2b, sul1, tetG, floR, and qacEΔ1 in multidrug-resistant Salmonella Typhimurium ST19 strains.
Characteristics and Epidemiology of Extended-Spectrum β-Lactamase-Producing Multidrug-Resistant Klebsiella pneumoniae From Red Kangaroo, China.
The study identified multiple AMR genes in a multidrug-resistant Klebsiella pneumoniae isolate from a Red Kangaroo, including beta-lactamases (bla DHA–3, bla SHV–1, bla CTX–M–14, bla TEM–191, bla TEM–1, bla CTX–M–3), aminoglycoside resistance genes (aph(3″)-Ib, aph(6)-Id, aac(3)-IIa, aac(6′)-Ib-cr, aadA16, arr-3), quinolone resistance genes (qnrS1, qnrB2), macrolide resistance gene (mphA), sulfonamide resistance genes (sul3, sul1), dihydrofolate reductase (dfrA3, dfrA27), chloramphenicol resistance gene (floR), tetracycline resistance genes (tetG, tetR), and multidrug efflux pump (qacEΔ1).
Molecular characterisation of extended-spectrum ß-lactamase producing Escherichia coli in wild birds and cattle, Ibadan, Nigeria.
The study identified various AMR genes in ESBL-producing E. coli from wild birds and cattle in Nigeria, including bla CTX-M1/15, bla CTX-M9, strB, sul2, tetA, and others. These genes were associated with resistance to multiple antibiotics, highlighting the potential for inter-species transmission of AMR bacteria.
Detection of diverse carbapenem and multidrug resistance genes and high-risk strain types among carbapenem non-susceptible clinical isolates of target gram-negative bacteria in Kenya.
The study identified various carbapenemase genes (blaNDM-1, blaNDM-5, blaVIM-1, blaVIM-6, blaOXA-23, blaOXA-58, blaOXA-66, blaOXA-69, blaOXA-91, blaOXA-181, blaOXA-50) and other resistance genes (such as armA, rmtC, rmtF, aac(3)-I, aadA1, aph(3')-Ia, aph(3')-VI, aph(3')-Via, aph(6')-Id, mphE, msrE, mphA, ereA, dfrA1, dfrA12, dfrA14, dfrA17, dfrA20, sul1, sul2, tetB, tetD, tetG, tet39, qnrVC1, qnrS1, qnrB4, floR, catA1, catA2, catB3, catB7, cmlA1, cmlA5, arr-3, arr-2, sat2, acrF, mdtM, emrD, mexA, mexE, mexX, kdeA, oxa-10, oxa-395, oxa-396, oxa-846, adc-25, dha-1, act-16, cmY, ctx-m-15, shv-67, tem-1b) in carbapenem non-susceptible clinical isolates of gram-negative bacteria in Kenya, highlighting the diversity and prevalence of multidrug resistance.
Metabolically Active Prokaryotes and Actively Transcribed Antibiotic Resistance Genes in Sewer Systems: Implications for Public Health and Microbially Induced Corrosion.
Three antibiotic resistance genes (sul 1, bla TEM, and tet (G)) were actively transcribed in sewer systems, indicating their potential role in antibiotic resistance. These genes were detected in sewer sediment samples, suggesting their involvement in the spread of resistance in environmental settings.
Effects of Ursolic Acid on Intestinal Health and Gut Bacteria Antibiotic Resistance in Mice.
Ursolic acid reduced the expression of tetracycline resistance genes in the gut microbiota of antibiotic-exposed mice.
Effects of Ursolic Acid on Intestinal Health and Gut Bacteria Antibiotic Resistance in Mice.
Ursolic acid reduced the expression of tetracycline resistance genes in the gut microbiota of antibiotic-exposed mice.
Genomic Analysis of Delftia tsuruhatensis Strain TR1180 Isolated From A Patient From China With In4-Like Integron-Associated Antimicrobial Resistance.
The study identified multiple antimicrobial resistance genes in Delftia tsuruhatensis TR1180, including blaOXA-118, oqxB, dfrA16, aac(6')-Ib3, aadA2, sul1, floR, and tet(G), which correspond to the strain's resistance to beta-lactams, fluoroquinolones, sulfonamides, aminoglycosides, and tetracyclines.
Antibiotic Susceptibility Profile and Tetracycline Resistance Genes Detection in Salmonella spp. Strains Isolated from Animals and Food.
The study identified multiple tetracycline resistance genes (tet(A), tet(B), tet(C), tet(D), tet(E), and tet(G)) in Salmonella spp. strains isolated from animals and food, highlighting the prevalence of these genes and their potential role in the spread of antibiotic resistance.
Analysis of antibiotic-induced drug resistance of Salmonella enteritidis and its biofilm formation mechanism.
The study identified several antibiotic resistance genes in Salmonella enteritidis, including sul2, sul3, blaTEM-1-like, tet(A), and tet(G). These genes contribute to resistance against sulfamethoxazole, ampicillin, cefoxitin, cefotaxime, cefoperazone, ceftriaxone, cefepime, and tetracycline.
Genomic Characterization of Endemic and Ecdemic Non-typhoidal Salmonella enterica Lineages Circulating Among Animals and Animal Products in South Africa.
The study identified streptomycin and tetracycline resistance-conferring genes in South African Salmonella enterica lineages, highlighting the presence of antimicrobial resistance in animal and animal product isolates.
CRISPR Element Patterns vs. Pathoadaptability of Clinical Pseudomonas aeruginosa Isolates from a Medical Center in Moscow, Russia.
The study identified multiple antibiotic resistance genes in clinical Pseudomonas aeruginosa isolates, including blaVIM-2, blaOXA-396, blaOXA-488, floR, tetG, sul1, dfrA5, dfrB2, dfrB5, aph(3)-Ib, blaPAO, catB7, and fosA, which confer resistance to various antibiotics such as beta-lactams, chloramphenicol, tetracycline, sulfonamides, trimethoprim, aminoglycosides, and fosfomycin.
Impact of Antibiotic Therapies on Resistance Genes Dynamic and Composition of the Animal Gut Microbiota.
The study examined the impact of antibiotic therapies on the dynamics and composition of resistance genes in the animal gut microbiota, identifying several AMR genes such as blaTEM, tetA, strA, strB, intI1, tetM, mel, floR, mcr-2, oqx B, tetC, tetG, tetO, tetW, tetX, ermB, ermF, sul1, sul2, and others, which were experimentally validated in Escherichia coli.
MALDI-TOF MS for rapid detection and differentiation between Tet(X)-producers and non-Tet(X)-producing tetracycline-resistant Gram-negative bacteria.
The study presents the MALDI Tet(X)-plus test, a rapid and reliable method for detecting Tet(X)-producers, non-Tet(X)-producing tetracycline-resistant, and tetracycline-susceptible Gram-negative bacteria. It identifies various tetracycline resistance genes such as tet(A), tet(B), tet(D), tet(G), tet(M), tet(X3), tet(X4), tet(X2)-tet(X6), tet(X3)-tet(X6), and TMexCD1-TOprJ1.
Genomic Characterization of Carbapenem-Non-susceptible Pseudomonas aeruginosa Clinical Isolates From Saudi Arabia Revealed a Global Dissemination of GES-5-Producing ST235 and VIM-2-Producing ST233 Sub-Lineages.
The study identified GES-5-producing ST235 and VIM-2-producing ST233 sub-lineages of Pseudomonas aeruginosa in Saudi Arabia, highlighting their global dissemination and the presence of various resistance genes including blaGES-5, blaVIM-2, and others.
Pan-Genome Analysis of Delftia tsuruhatensis Reveals Important Traits Concerning the Genetic Diversity, Pathogenicity, and Biotechnological Properties of the Species.
The study identifies multiple antimicrobial resistance genes in Delftia tsuruhatensis, including aminoglycoside, sulfonamide, trimethoprim, tetracycline, and phenicol resistance genes, indicating the potential for multidrug resistance in this species.
Co-selective Pressure of Cadmium and Doxycycline on the Antibiotic and Heavy Metal Resistance Genes in Ditch Wetlands.
The study identified several tetracycline resistance genes (tetA, tetG), a cadmium resistance gene (czcA), and a mobile genetic element (intI1) that were significantly enriched under co-exposure to cadmium and doxycycline in ditch wetlands.
Genetic Diversity, Distribution, and Genomic Characterization of Antibiotic Resistance and Virulence of Clinical Pseudomonas aeruginosa Strains in Kenya.
The study identified multiple AMR genes and mutations in P. aeruginosa isolates from Kenya, including carbapenemases (blaNDM-1, blaVIM-6), fluoroquinolone resistance genes (qnrVC1, crpP), aminoglycoside resistance genes (aac(3)-IId, aph(3')-Ib, ant(3'')-Ia), tetracycline resistance genes (tetA, tetG), phenicol resistance genes (floR, cmlA), sulfonamide resistance gene (sul), trimethoprim resistance gene (dfrB), glycopeptide resistance gene (ble), and macrolide resistance gene (EreA). Additionally, mutations in gyrA and parC were associated with fluoroquinolone resistance.
Analysis of Salmonella enterica Isolated from a Mixed-Use Watershed in Georgia, USA: Antimicrobial Resistance, Serotype Diversity, and Genetic Relatedness to Human Isolates.
The study identified multiple antimicrobial resistance genes in Salmonella enterica isolates from a mixed-use watershed in Georgia, USA, including bla CMY-2, aadA2, strA, strB, sul1, sul2, tetA, tetC, floR, and dfrA12, which conferred resistance to various antibiotics such as ceftiofur, ceftriaxone, streptomycin, sulfisoxazole, tetracycline, chloramphenicol, and trimethoprim.
Occurrence of antibiotics and bacterial resistance genes in wastewater: resistance mechanisms and antimicrobial resistance control approaches.
The study identifies several AMR genes and mutations associated with resistance to various antibiotics in wastewater environments, highlighting the role of these genes in the spread of antimicrobial resistance.
Assessment of multidrug-resistant Listeria monocytogenes in milk and milk product and One Health perspective.
The study identified multiple antimicrobial resistance genes in Listeria monocytogenes isolates from milk and milk products, including beta-lactamase genes (bla TEM, bla SHV, bla Z), tetracycline resistance genes (tet A, tet D, tet G, tet K, tet M), sulfonamide resistance genes (sul 1, sul 2), and an aminoglycoside resistance gene (aph (3)-IIa (aphA2)).
Antimicrobial Resistance and Genetic Diversity of Pseudomonas aeruginosa Strains Isolated from Equine and Other Veterinary Samples.
The study identified several AMR genes in Pseudomonas aeruginosa strains isolated from equine and other veterinary samples, including beta-lactamases, aminoglycoside modifying enzymes, quinolone resistance genes, sulfonamide resistance genes, phenicol resistance genes, tetracycline resistance genes, and efflux pumps. Additionally, genes conferring resistance to quaternary ammonium compounds were detected.
Correlations among Antibiotic Resistance Genes, Mobile Genetic Elements and Microbial Communities in Municipal Sewage Treatment Plants Revealed by High-Throughput Sequencing.
The study identifies various tetracycline resistance genes (tetC, tetE, tetG, tetM, tetO, tetQ, tetW, tetX), sulfonamide resistance gene (sulI), aminoglycoside resistance genes (ant(2')-Ia, ant(3')-Ia, aph(6')-Id, aph(33')-Ib, aac(6')-Ib), beta-lactam resistance genes (blaGES, blaVEB), chloramphenicol resistance gene (catB3), MLS resistance genes (ereA, ermB), and multidrug resistance genes (acrB, mexB, mexF) in municipal sewage treatment plants, highlighting their association with mobile genetic elements and microbial communities.
Genome Analysis of Pseudomonas aeruginosa Strains from Chronically Infected Patients with High Levels of Persister Formation.
The study identified multiple AMR genes and efflux pump systems in P. aeruginosa persister isolates, highlighting their multidrug-resistant phenotype and biofilm-forming capabilities.
High Genetic Diversity of Carbapenem-Resistant Acinetobacter baumannii Isolates Recovered in Nigerian Hospitals in 2016 to 2020.
The study identified blaOXA-23 and blaNDM-1 as the most common carbapenem resistance genes in Acinetobacter baumannii isolates from Nigerian hospitals, along with several other AMR genes and mutations contributing to multidrug resistance.
Antimicrobial resistance and virulence genes of invasive Salmonella enterica from children with bacteremia in north-central Nigeria.
The study identified multiple antimicrobial resistance genes in invasive Salmonella enterica isolates from children with bacteremia in north-central Nigeria, including bla TEM, flo R, qnr A, tet A, tet B, and tet G. These genes conferred resistance to various antibiotics such as ampicillin, trimethoprim-sulfamethoxazole, chloramphenicol, tetracycline, and ciprofloxacin.
Multidrug-resistant non-typhoidal Salmonella of public health significance recovered from migratory birds in Bangladesh.
The study identified multidrug-resistant non-typhoidal Salmonella in migratory birds in Bangladesh, highlighting the presence of various AMR genes such as blaCARB-2, floR, sul1, tet(G), dfrA1, and mutations in gyrA and parC associated with quinolone resistance.
Genomics and Antimicrobial Susceptibility of Clinical Pseudomonas aeruginosa Isolates from Hospitals in Brazil.
The study identified several AMR genes, including blaCTX-M-2, blaKPC-2, and tetG, in P. aeruginosa isolates from Brazil. These genes conferred resistance to various beta-lactam and tetracycline antibiotics.
The multidrug-resistant Pseudomonas fluorescens strain: a hidden threat in boar semen preservation.
The study identifies multiple acquired antibiotic resistance genes in the Pseudomonas fluorescens strain GXZC, including those conferring resistance to aminoglycosides, tetracyclines, and sulfonamides. The strain exhibits multidrug resistance and poses a risk in boar semen preservation.
Genomic epidemiology and molecular characteristics of bla(NDM-1)-positive carbapenem-resistant Pseudomonas aeruginosa belonging to international high-risk clone ST773 in the Gauteng region, South Africa.
The study identifies bla NDM-1-positive carbapenem-resistant Pseudomonas aeruginosa isolates belonging to the international high-risk clone ST773 in the Gauteng region, South Africa. These isolates harbor various antibiotic resistance genes, including bla NDM-1, aad A11, qnr VC1, flo R2/cml A9, rmt B4, tet G, bla OXA-906, and bla PDC-19b, contributing to their extensive drug resistance.
Heterogeneous Antibiotic Resistance Gene Removal Impedes Evaluation of Constructed Wetlands for Effective Greywater Treatment.
The study identifies several antibiotic resistance genes (ARGs) in greywater and filter bed samples, including blaTEM, sul1, intI1, tetG, tetW, and others, indicating the presence of resistance to beta-lactams, sulfonamides, tetracyclines, and other antibiotics. The research highlights the variability in ARG removal efficiency by constructed wetlands and the potential for ARG proliferation in treated greywater.
Four novel Acinetobacter lwoffii strains isolated from the milk of cows in China with subclinical mastitis.
Four Acinetobacter lwoffii strains were isolated from the milk of cows with subclinical mastitis in China. These strains exhibited multidrug resistance and carried 17 resistance genes, including beta-lactamase, aminoglycoside-modifying, fluoroquinolone, tetracycline, sulfonamide, and chloramphenicol resistance genes.
Combatting extensively drug-resistant Salmonella: a global perspective on outbreaks, impacts, and control strategies.
The paper discusses the emergence and global spread of extensively drug-resistant (XDR) Salmonella, highlighting the resistance mechanisms involving genes such as blaCTX-M-15, floR, cat1, cat2, strA, strB, aacC(3), aadA, ant(3")-Ia, aph(3)-IIa, tet(A), tet(B), tet(D), tet(G), tet(H), dfrA10, dhfrXII, sul1, sul2, sul3, mphA, and ermB.
First Detection of High-Level Aminoglycoside-Resistant Klebsiella pneumoniae and Enterobacter cloacae Isolates Due to 16S rRNA Methyltransferases with and Without bla(NDM) in Uruguay.
The study identifies the first detection of high-level aminoglycoside-resistant Klebsiella pneumoniae and Enterobacter cloacae isolates in Uruguay, carrying 16S rRNA methyltransferases (rmtB, rmtC, rmtD) along with carbapenemase genes (bla NDM-5, bla NDM-1).
Genomic insights into the dynamic antibiotic resistance landscape of Vibrio cholerae during the Cholera outbreak 2022 in Odisha, India.
The tetracycline resistome is shaped by selection for specific resistance mechanisms by each antibiotic generation.
The study identifies specific tetracycline resistance mechanisms (efflux pumps, ribosomal protection proteins, and type 1 tetracycline destructases) that are preferentially selected by different generations of tetracycline antibiotics, highlighting the evolutionary dynamics of resistance.
Genomic epidemiology and antimicrobial resistance of Morganella clinical isolates between 2016 and 2023.
The study identified several AMR genes in Morganella clinical isolates, including tet(B), sul1, catA2, sul2, floR, aadA1, and others, contributing to resistance against various antibiotics.
Real-time investigation of a Burkholderia cenocepacia bacteraemia outbreak in a Vietnamese intensive care unit.
The study identified acquired antimicrobial resistance genes in B. cenocepacia isolates from a bacteraemia outbreak, including aphA6, blaNDM-1, blaPME-1, sul1, and tetG, which conferred resistance to aminoglycosides, carbapenems, sulfonamides, and tetracyclines. No acquired AMR genes were found in the STNF outbreak isolates.
Analysis of intrahospital and global dissemination and resistome dynamics of NDM-1-producing ST773 Pseudomonas aeruginosa high-risk clone.
Pan-genome analysis of the Enterobacter hormaechei complex highlights its genomic flexibility and pertinence as a multidrug resistant pathogen.
The study identifies a wide range of antibiotic resistance genes in the Enterobacter hormaechei complex, highlighting its multidrug-resistant nature and the role of mobile genetic elements in the dissemination of resistance.
The genomic configurations driving antimicrobial resistance and virulence in colistin resistant Pseudomonas aeruginosa from an Egyptian Tertiary Oncology Hospital.
The study identified several AMR genes and mutations in colistin-resistant P. aeruginosa isolates, including blaNDM-1, blaOXA-1028, blaOXA-904, and mutations in phoQ and basR genes associated with colistin resistance.
The genomic configurations driving antimicrobial resistance and virulence in colistin resistant Pseudomonas aeruginosa from an Egyptian Tertiary Oncology Hospital.
The study identified several AMR genes and mutations in colistin-resistant P. aeruginosa isolates, including blaNDM-1, blaOXA-1028, blaOXA-904, and mutations in phoQ and basR genes associated with colistin resistance.
Multidrug-resistant Pseudomonas aeruginosa: Pathogenesis, resistance mechanisms, and novel therapeutic strategies.
The paper discusses the multidrug resistance mechanisms of Pseudomonas aeruginosa, including beta-lactamases, aminoglycoside modifying enzymes, efflux pumps, and mutations in porin genes. It highlights the role of these mechanisms in antibiotic resistance and the challenges they pose in treating infections.
Acquisition of novel antibiotic resistance genes by the bacterial predator Bacteriovorax sp. As-1.
Bacteriovorax sp. As-1 exhibits resistance to multiple antibiotics, primarily due to mutations in the gyrA gene, specifically S90Y and G94R, which are associated with reduced fluoroquinolone susceptibility.
Genetic and virulence factors behind the success of high-risk Pseudomonas aeruginosa clones: insights from comparative genomics and an experimental infection model.
The study identified 15 AMR genes significantly more frequent in high-risk P. aeruginosa clones, including aminoglycoside, beta-lactam, phenicol, fluoroquinolone, trimethoprim, sulfonamide, and tetracycline resistance genes. These genes are often associated with mobile genetic elements, indicating a mobility-linked resistome in high-risk clones.
Comparative assessment of annotation tools reveals critical antimicrobial resistance knowledge gaps in Klebsiella pneumoniae.
The study identifies various AMR genes and mutations in Klebsiella pneumoniae, highlighting knowledge gaps in existing annotation tools and databases for accurate resistance prediction.
Genomic diversity and antimicrobial resistance of Vibrio cholerae isolates from Africa: a PulseNet Africa initiative using nanopore sequencing to enhance genomic surveillance.
The study identified a high prevalence of trimethoprim resistance genes (dfrA1, dfrA15, dfrA31) and other resistance genes such as floR, strA, strB, varG, blaCARB-2, aadA1, aadA2, sul1, sul2, catB9, tet(C), tet(G), tet(59), qacEdelta, and blaCMY-4 in Vibrio cholerae isolates from Africa. Fluoroquinolone resistance mutations (gyrA_S83I and parC_S85L) and nitrofuran resistance mutations (nfsA_R169C and nfsB_Q5*) were also prevalent.
A quantitative characterization of antibiotic resistance and its influencing factors in hospital wastewaters across Lebanon.
The study identifies multiple antibiotic resistance genes (ARGs) and mobile genetic elements (MGEs) in hospital wastewaters across Lebanon, highlighting the prevalence of resistance to beta-lactams, aminoglycosides, tetracyclines, sulfonamides, and glycopeptides.
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