Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
thymidylate synthase A
Overview
| Protein Change | Nucleotide Change | Mechanism | Organism | Resistance To | Database | Validation Status |
|---|---|---|---|---|---|---|
| A114V | - | - | - | para aminosalicylic acid | Reslit | Candidate |
| W80* | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| Q10P | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| F176L | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| H75N | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ReslitResFinder DatabaseCard Database | Candidate |
| T202A | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acidpyrazinamide | ReslitCard Database | Candidate | |
| Q111X | - | - | - | para aminosalicylic acid | Reslit | Candidate |
| T26P | - | - | - | para aminosalicylic acid | Reslit | Candidate |
| S125F | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| Y94C | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| Q97R | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| V135F | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| T51M | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| D305G | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| N92K | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| P303R | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| F231Y | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| T51A | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| L214Q | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| L2Q | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| L2W | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| P303G | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| Q124K | - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate |
| R127L | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| L143P | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| C146R | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| L172P | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| A182P | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| V261G | - | The mutation leads to changes in the dUMP and MTHF binding sites, weak interaction of ThyA enzyme with dUMP and MTHF, loss of hydrogen bond and other atomic interactions, and enhanced movement of protein atoms. | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| R235P | loss of function, single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ReslitResFinder DatabaseCard Database | Candidate | |
| A113G | - | - | Mycobacterium tuberculosis | trimethoprim | Reslit | Candidate |
| D20Y | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| 39fs | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| E137G | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| 264fs | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate |
| E58Q | - | - | Escherichia coli | trimethoprim sulfamethoxazole | Reslit | Candidate |
| T22A | - | single resistance variant | Mycobacterium tuberculosis | paspara aminosalicylic acid | ReslitResFinder DatabaseCard Database | Candidate |
| R222G | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
| W101R | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| Y36C | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| G76* | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
| V77F | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| W83C | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| W83* | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
| G91R | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| W98* | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
| S105P | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| R126Q | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| F152V | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| C161Y | - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
| H207R | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| P224L | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder DatabaseCard Database | Candidate |
| W98Ter | - | nonsense mutation | Mycobacterium tuberculosis | para aminosalicylic acid | Card Database | Candidate |
| W83Ter | - | nonsense mutation | Mycobacterium tuberculosis | para aminosalicylic acid | Card Database | Candidate |
| G76Ter | - | nonsense mutation | Mycobacterium tuberculosis | para aminosalicylic acid | Card Database | Candidate |
| C161T | - | single resistance variant | Mycobacterium tuberculosis | para aminosalicylic acid | Card Database | Candidate |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | Reslit | Candidate | |
| - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | Staphylococcus aureus | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | - | trimethoprim sulfamethoxazole | Reslit | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate | |
| - | - | Mycobacterium tuberculosis | para aminosalicylic acid | ResFinder Database | Candidate |
Molecular genetics of para-aminosalicylic acid resistance in clinical isolates and spontaneous mutants of Mycobacterium tuberculosis.
The study identifies mutations in the thyA gene as a cause of para-aminosalicylic acid (PAS) resistance in Mycobacterium tuberculosis, with 37% of PAS-resistant isolates having such mutations.
dfrA thyA Double Deletion in para-Aminosalicylic Acid-Resistant Mycobacterium tuberculosis Beijing Strains.
Deletions in dfrA and thyA contribute to para-aminosalicylic acid resistance in Mycobacterium tuberculosis Beijing strains.
Inactivation of the Thymidylate Synthase thyA in Non-typeable Haemophilus influenzae Modulates Antibiotic Resistance and Has a Strong Impact on Its Interplay with the Host Airways.
Inactivation of the thyA gene in non-typeable Haemophilus influenzae increases resistance to cotrimoxazole (TxS) and affects bacterial physiology and host interactions.
Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance.
The study identifies 33 known AMR genes and 24 new genetic signatures of AMR in Mycobacterium tuberculosis using machine learning and structural analysis. It also reveals 97 epistatic interactions across 10 resistance classes and provides mechanistic insights into the selection of these genes.
Evolutionary Coupling of Folate Metabolic Enzymes Reveals Adaptive Units in Bacterial Adaptation
The study identifies DHFR and TYMS as an adaptive unit in folate metabolism, showing that mutations in these genes can confer resistance to trimethoprim through balanced metabolite concentration regulation.
A biochemically-interpretable machine learning classifier for microbial GWAS.
The study identifies pncA, ppsA, ansP2, thyA, cysK2, and katG as key genetic determinants of pyrazinamide, para-aminosalicylic acid, and isoniazid resistance in Mycobacterium tuberculosis using a metabolic allele classifier (MAC).
Molecular mechanisms of underlying genetic factors and associated mutations for drug resistance in Mycobacterium tuberculosis.
The study identifies several genes and mutations associated with drug resistance in Mycobacterium tuberculosis, including katG, inhA, rpoB, embB, pncA, rpsL, rrs, gyrA, thyA, and folC, which are linked to resistance against isoniazid, ethambutol, rifampicin, streptomycin, aminoglycosides, fluoroquinolones, and para-aminosalicylic acid.
Intragenic Distribution of IS6110 in Clinical Mycobacterium tuberculosis Strains: Bioinformatic Evidence for Gene Disruption Leading to Underdiagnosed Antibiotic Resistance.
The study identifies IS6110-mediated gene disruptions in clinical Mycobacterium tuberculosis strains that lead to resistance against bedaquiline, clofazimine, ethionamide, pyrazinamide, and para-aminosalicylic acid.
Adaptation of S. aureus towards persistence in cystic fibrosis using WGS
The paper discusses the genetic adaptation of Staphylococcus aureus in cystic fibrosis patients, highlighting the role of horizontal gene transfer, mutations, and regulatory mechanisms in the development of persistent infections and resistance. It emphasizes the importance of whole genome sequencing in understanding the population dynamics and evolution of S. aureus in the CF airways.
CGA-LMM identifies expected interactions for anti-tubercular drugs with known mechanisms
The study identifies genes involved in resistance to anti-tubercular drugs through chemical-genetic interaction analysis, highlighting gyrA, rpoB, thyA, ino1, and kasB as key players in resistance mechanisms for fluoroquinolones, rifampin, sulfamethoxazole, and isoniazid.
Phenotypic and genotypic characterisation of thymine auxotrophy in Escherichia coli isolated from a patient with recurrent bloodstream infection.
The study identifies a G172C mutation in the thyA gene, leading to thymine auxotrophy and resistance to TMP-SMX in E. coli isolates from a patient with recurrent bloodstream infections.
Determination of critical concentration for drug susceptibility testing of Mycobacterium tuberculosis against para-aminosalicylic acid with clinical isolates with thyA, folC and dfrA mutations.
The study identifies thyA, folC, and dfrA mutations as the primary mechanisms of para-aminosalicylic acid (PAS) resistance in Mycobacterium tuberculosis. It establishes 4 μg/ml as the critical concentration for distinguishing PAS-susceptible and resistant isolates.
Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.
The study identified multiple AMR genes and mutations in Mycobacterium tuberculosis variant bovis strains from Mato Grosso, Brazil, including resistance to pyrazinamide, isoniazid, rifampicin, streptomycin, ethambutol, ethionamide, fluoroquinolones, kanamycin, capreomycin, paraminosalicylic acid, cycloserine, bedaquiline, linezolid, and delamanid.
Comparative genome analysis reveals high-level drug resistance markers in a clinical isolate of Mycobacterium fortuitum subsp. fortuitum MF GZ001.
The study identifies multiple drug resistance markers in the clinical isolate of Mycobacterium fortuitum subsp. fortuitum MF GZ001, including mutations in genes such as rpoB, katG, AAC(2')-Ib, gyrA, gyrB, embB, pncA, thyA, embC, embR, and iniA, which confer resistance to various antibiotics.
Whole genome sequencing reveals candidate genes involving in PAS resistance in M. Tuberculosis isolated from patients in Thailand.
The study identified mutations in thyA, thyX, folC, and ribD genes, along with intergenic regions, that contribute to PAS resistance in M. tuberculosis. These mutations were validated through complementation assays and MIC testing.
Evolutionary trajectory of bacterial resistance to antibiotics and antimicrobial peptides in Escherichia coli.
The study reveals that E. coli develops resistance to antibiotics faster than to antimicrobial peptides (AMPs). Trimethoprim-resistant E. coli with mutations in the thyA gene shows increased susceptibility to pexiganan.
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