Browse AMR Genes
Explore antimicrobial resistance genes from the literature
Explore antimicrobial resistance genes from the literature
D-alanine--D-serine ligase VanG-Cd
Overview
| Allele | Database | Papers | Drug Classes | Organisms | Countries | Years | Sequence Accession | Protein Accession |
|---|---|---|---|---|---|---|---|---|
| VanG-Cd | Reference Gene Catalog | 1 | VANCOMYCIN | Clostridioides difficile | - | - | MOTD01000025.1 | PBI24747.1 |
| vanG | Card Database | 1 | - | Enterococcus faecalis | - | - | DQ212986.1 | ABA71731.1 |
| VanG | Card DatabaseReference Gene CatalogReslit | 40 | vancomycin, VANCOMYCIN +2 | Enterococcus faecalis +36 | Australia, New York City|New Mexico, United States, China|Canada|UK, China, wastewater treatment plants|Canada, China|United States|United Kingdom|Europe, Germany, Global, South Africa, International Space Station, Indonesia, New Mexico, Egypt, Various zoo locations, Europe|Midwestern United States, Bangladesh, China|Xinjiang, Northern Italy, Europe, Scotland, Mayurbhanj, Odisha, India|India | 2000, 2003, 2007, 2012, 2014, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025 | AF253562 | AAF71281.1 |
| VanG2 | Reference Gene Catalog | 1 | VANCOMYCIN | Enterococcus faecalis | - | 2006 | FJ872410.1 | ABB17543.1 |
| VanG-type | Reslit | 1 | vancomycin | Enterococcus faecalis | Bangladesh | 2023 | - | - |
Genetic characterization of vanG, a novel vancomycin resistance locus of Enterococcus faecalis.
The study identified a novel vancomycin resistance locus, vanG, in Enterococcus faecalis strain WCH9, which confers moderate resistance to vancomycin and full susceptibility to teicoplanin.
Genetic characterization of vanG, a novel vancomycin resistance locus of Enterococcus faecalis.
The vanG glycopeptide resistance operon from Enterococcus faecalis revisited.
The vanG glycopeptide resistance operon from Enterococcus faecalis revisited.
VanG-type vancomycin-resistant Enterococcus faecalis strains isolated in Canada.
vanD and vanG-like gene clusters in a Ruminococcus species isolated from human bowel flora.
The study identifies vanD and vanG-like gene clusters in a novel Ruminococcus species isolated from human bowel flora, demonstrating resistance to vancomycin and teicoplanin.
Structural and functional characterization of VanG d-Ala:d-Ser ligase associated with vancomycin resistance in Enterococcus faecalis.
The study characterizes VanG, a d-Ala:d-Ser ligase associated with vancomycin resistance in Enterococcus faecalis, revealing its structural and functional properties, including its role in synthesizing modified peptidoglycan precursors that reduce vancomycin binding affinity.
Two cases of invasive vancomycin-resistant group B streptococcus infection.
The paper reports the first laboratory-confirmed cases of vancomycin-resistant group B streptococcus (GBS) infections, identifying the vanG gene as responsible for vancomycin resistance.
vanG element insertions within a conserved chromosomal site conferring vancomycin resistance to Streptococcus agalactiae and Streptococcus anginosus.
The study identifies vanG elements as the cause of vancomycin resistance in Streptococcus agalactiae and Streptococcus anginosus, showing that these elements are inserted into the rumA gene and confer resistance through the production of d-Ala-d-Ser peptidoglycan precursors.
Genome Analysis of Clostridium difficile PCR Ribotype 014 Lineage in Australian Pigs and Humans Reveals a Diverse Genetic Repertoire and Signatures of Long-Range Interspecies Transmission.
The study identified several AMR genes in C. difficile RT014 isolates, including tetracycline resistance genes (tetM, tetA(P), tetB(P), tetW), macrolide/lincosamide/streptogramin resistance gene ermB, and aminoglycoside resistance genes (aph3-III, Sat4A, ant6-Ia).
Genome characterization of a novel binary toxin-positive strain of Clostridium difficile and comparison with the epidemic 027 and 078 strains.
The study identified several antibiotic resistance genes in the ST201 strains of Clostridium difficile, including vancomycin resistance operons (VanA, VanB, VanG, VanE), virginiamycin A acetyltransferase, multidrug resistance efflux pumps, bacitracin resistance genes, tetracycline resistance genes, and fluoroquinolone resistance genes.
The complex resistomes of Paenibacillaceae reflect diverse antibiotic chemical ecologies.
The study explores the complex resistomes of Paenibacillaceae, revealing diverse antibiotic resistance mechanisms including intrinsic and acquired resistance genes such as aadD2, vanA, vanB, vanC, vanD, vanE, vanF, vanG, mcr, bla, tet, qnr, erm, mph, lnu, lsa, vat, vgb, cat, cfr, optrA, poxtA, sul, dfr, mexAB-OprM, acrAB-TolC, and oqxAB.
Characterization of a Linezolid- and Vancomycin-Resistant Streptococcus suis Isolate That Harbors optrA and vanG Operons.
The study reports the first linezolid- and vancomycin-resistant Streptococcus suis isolate harboring the optrA and vanG operons, indicating the potential risk of these resistance genes spreading to other Gram-positive bacteria.
Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants.
The study identified several AMR genes in multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants, including vancomycin resistance genes (vanA, vanM, vanG, vanC), macrolide resistance genes (ermB, msrC), tetracycline resistance genes (tetL), aminoglycoside resistance genes (aad(6'), aac(6')-Ie-aph(2")-Ia, ant(9')-Ia, aph(3')-IIIa, SAT-4, ant(6')-Ia), chloramphenicol resistance gene (cat), dihydrofolate reductase genes (dfrE, dfrF, dfrG), and lincosamide resistance genes (InuB, InuG).
Raman-activated sorting of antibiotic-resistant bacteria in human gut microbiota.
The study identified several antibiotic resistance genes (ARGs) in human gut microbiota, including beta-lactam resistance genes (PBP-1A and PBP-2X) and vancomycin resistance genes (vanG, vanH, vanR, and vanU). These genes were found in various bacterial species and were linked to the resistance phenotypes of the bacteria.
Probiotics impact the antibiotic resistance gene reservoir along the human GI tract in a person-specific and antibiotic-dependent manner.
Probiotics can reduce the number of antibiotic resistance genes in the gut of colonization-permissive, antibiotic-naïve individuals but exacerbate resistome expansion in the GI mucosa after antibiotic treatment by supporting the bloom of strains carrying vancomycin resistance genes.
Resistome Analysis of Global Livestock and Soil Microbiomes.
The study identified numerous antimicrobial resistance genes (ARGs) in livestock and soil microbiomes, including tetracycline resistance genes (tet(W)_1, tet(Q)_1, tet(O)_1, tet(44)_1), macrolide resistance gene (ole(B)_1), colistin resistance genes (mcr-1.11, mcr-5.1, mcr-7.1), and vancomycin resistance genes (vanG, vanA-B, vanH-B, vanXY-G).
VanG- and D-Ala-D-Ser-dependent peptidoglycan synthesis and vancomycin resistance in Clostridioides difficile.
Mutations in vanR or vanS lead to constitutive expression of the vanG operon, allowing D-Ala-D-Ser synthesis and low-level vancomycin resistance in C. difficile.
The resistomes of Mycobacteroides abscessus complex and their possible acquisition from horizontal gene transfer.
The study identifies numerous AMR genes in Mycobacteroides abscessus complex, highlighting the widespread presence of resistance to multiple antibiotic classes, including beta-lactams, aminoglycosides, glycopeptides, and others. Key findings include the detection of beta-lactamases like blaLAP-1 and blaTLA-2, 23S rRNA methyltransferases such as erm(33), erm(43), and erm(44), and various aminoglycoside modifying enzymes. Additionally, vancomycin resistance genes like vanA, vanB, and vanC were identified, along with efflux pump genes contributing to multidrug resistance.
Clostridioides difficile in South American Camelids in Germany: First Insights into Molecular and Genetic Characteristics and Antimicrobial Resistance.
The study identified several AMR genes and mutations in C. difficile isolates from South American camelids in Germany, including bla_CDD-1, vanZ1, aadE, tet(M), tet(40), vanG, vanR, vanS, vanT, and mutations in gyrA and gyrB associated with fluoroquinolone resistance.
Vancomycin Resistance in Enterococcus and Staphylococcus aureus.
The paper discusses the genetic basis of antibiotic resistance mechanisms in Enterococcus and Staphylococcus aureus, focusing on various resistance genes and mutations associated with glycopeptides, aminoglycosides, beta-lactams, macrolides, lincosamides, streptogramins, quinolones, tetracyclines, and fosfomycin.
Virulence and antibiotic-resistance genes in Enterococcus faecalis associated with streptococcosis disease in fish.
The study identified various antibiotic-resistance genes in three strains of Enterococcus faecalis associated with streptococcosis in fish, including genes conferring resistance to tetracycline, macrolide-lincosamide-streptogramin, and vancomycin.
Genome mining of Escherichia coli WG5D from drinking water source: unraveling antibiotic resistance genes, virulence factors, and pathogenicity.
The study identifies multiple antibiotic resistance genes in E. coli WG5D, including multidrug efflux pumps and genes conferring resistance to various antibiotics such as fluoroquinolones, cephalosporins, and glycopeptides.
Whole Genome Sequencing Highlights the Pathogenic Profile in Nocardia Keratitis.
The study identified antibiotic resistance genes (ARGs) in Nocardia strains, revealing resistance to multiple drugs including rifampin and vancomycin. The mce gene family was linked to the pathogenicity and clinical severity of Nocardia keratitis.
Genomic, functional, and metabolic enhancements in multidrug-resistant Enterobacter bugandensis facilitating its persistence and succession in the International Space Station.
The study identifies multiple antibiotic resistance genes in multidrug-resistant Enterobacter bugandensis strains isolated from the International Space Station, highlighting their potential to persist and succeed in extreme environments.
Detection of Vancomycin Resistant Genes in Intrinsically Antibiotic Resistant Bacteria from the Gut Microbiota of Indonesian Individuals.
The study identified vancomycin-resistant genes (vanA, vanB, vanC, vanD, vanE, vanG) in intrinsically antibiotic-resistant bacteria from the gut microbiota of Indonesian individuals, highlighting the potential role of these bacteria in the spread of antibiotic resistance through horizontal gene transfer.
Genome analysis of multidrug resistant Enterococcus faecium and Enterococcus faecalis circulating among hospitalized patients in uMgungundlovu District, KwaZulu-Natal, South Africa.
The study identified multiple AMR genes including VanC-1, VanG, Vex2, Vex3, emeA, Isa, ermB, TetM, fosB, ParC, ParE, gyrA, gyrB, MATE, MFS, and pmrA in multidrug-resistant Enterococcus faecium and Enterococcus faecalis. These genes conferred resistance to various antibiotics such as vancomycin, tetracycline, erythromycin, clindamycin, ciprofloxacin, and moxifloxacin.
The Emergent Invasive Serotype 4 ST10172 Strain Acquires vanG-Type Vancomycin-Resistance Element: A Case of a 66-Year-Old With Bacteremic Pneumococcal Pneumonia.
The study reports a vanG-type vancomycin-resistant Streptococcus pneumoniae isolate from a 66-year-old patient with bacteremic pneumococcal pneumonia, highlighting the emergence of this resistance mechanism in a novel serotype 4/ST10172 strain.
Hypermucoviscous Multidrug-Resistant Klebsiella variicola Strain LL2208 Isolated from Chinese Longsnout Catfish (Leiocassis longirostris): Highly Similar to Human K. variicola Strains.
The study identified a multidrug-resistant hypermucoviscous Klebsiella variicola strain LL2208 isolated from Chinese longsnout catfish, which exhibits resistance to various antibiotics including penicillins, macrolides, amphenicols, lincosamides, and glycopeptides. The strain possesses 30 antimicrobial resistance genes, including blaLEN-16, ompK37, pbp3, and vanG.
Genomic profiling of pan-drug resistant proteus mirabilis Isolates reveals antimicrobial resistance and virulence gene landscape.
The study identified multiple antimicrobial resistance genes in pan-drug resistant Proteus mirabilis isolates, including genes conferring resistance to aminoglycosides, beta-lactams, tetracyclines, sulfonamides, and others. These genes were found on the chromosome and contributed to the isolates' resistance to various antibiotic classes.
Exploring microbial diversity and biosynthetic potential in zoo and wildlife animal microbiomes.
The study identified various AMR genes in zoo animal microbiomes, including resistance to tetracyclines, lincomamides, fluoroquinolones, vancomycin, beta-lactams, and aminoglycosides.
Genomic and metabolic characterization of Trueperella pyogenes isolated from domestic and wild animals.
The study identified multiple antimicrobial resistance (AMR) genes in Trueperella pyogenes, including tet(W/32/O), erm(X), vanG, sul1, and qacEdelta1, which confer resistance to tetracyclines, MLS B, glycopeptides, sulfonamides, and biocides, respectively. These genes were detected in various T. pyogenes isolates from different animal hosts and body sites, highlighting the genetic diversity and potential for AMR dissemination among different hosts.
First report on comprehensive genomic analysis of a multidrug-resistant Enterobacter asburiae isolated from diabetic foot infection from Bangladesh.
The study identifies multiple antimicrobial resistance genes, including blaACT-2, fosA2, vanA, vanB, and vanG, in a multidrug-resistant Enterobacter asburiae isolate from a diabetic foot infection in Bangladesh.
Unveiling the silent threat: A comprehensive review of Riemerella anatipestifer - From pathogenesis to drug resistance.
This review highlights the pathogenesis, virulence factors, and antibiotic resistance genes of Riemerella anatipestifer, emphasizing its significance in poultry farming and the need for further research on its resistance mechanisms.
Virulence and resistance gene analysis of Rothia nasimurium by whole gene sequencing.
The study identified multiple AMR genes in Rothia nasimurium Y1, including vanA, vanC, vanB, vanE, vanD, vanG, vanF, vanM, vanL, vanO, vanN, mtrA, vanRA, arlR, vanRI, vanRB, vanRC, vanRD, vanRF, vanRG, CpxR, kdpE, vanRM, vanRN, baeR, adeR, vanRL, smeR, gyrA, gyrB, parC, Mfd, mfd, PBP2, PBP2x, EF-Tu, dfrE, pncA, tetB(P), tetQ, tet44, tetT, tetW, tetS, tetM, tetO, otr(A), tet36, tet32, clbC, clbB, clbA, cipA, cfrA, cfrC, sul3, ParY, murA, cls, and ileS, which confer resistance to various antibiotics such as glycopeptides, beta-lactams, fluoroquinolones, tetracyclines, sulfonamides, aminoglycosides, lincosamides, phenicols, macrolides, and others.
Wild Birds as Drivers of Salmonella Braenderup and Multidrug Resistant Bacteria in Wetlands of Northern Italy.
The study identifies several AMR genes in bacterial isolates from wild aquatic birds in Northern Italy, including beta-lactamases (blaTEM, blaCMY-1, blaCMY-2, blaNDM, blaKPC), colistin resistance genes (mcr-2, mcr-3, mcr-4), tetracycline resistance genes (tetA, tetB, tetC, tetL, tetM, tetK), macrolide resistance genes (ermB, vatD, vgA, msrC), vancomycin resistance genes (vanC1, vanC2, vanM, vanG), sulfonamide resistance genes (sul1, sul2, sul3), aminoglycoside resistance genes (aac(3), aac(6')-Ib, aph(3')-Ia, armA, rmtB, rmtC, rmtF), and nitrofurantoin resistance genes (nfsA, nfsB).
Comprehensive genome catalog analysis of the resistome, virulome and mobilome in the wild rodent gut microbiota.
The study identified numerous antibiotic resistance genes (ARGs) in the gut microbiota of wild rodents, including genes conferring resistance to elfamycin, tetracycline, and glycopeptides. Notable ARGs include Cdif_EFTu_ELF, Ecol_EFTu_KIR, Efac_EFTu_GE2A, Saur_fusA_FA, and Cdif_rpoB_RIF, which were found to be widely distributed among rodent gut microbiomes.
Comprehensive genomic analysis reveals virulence and antibiotic resistance genes in a multidrug-resistant Bacillus cereus isolated from hospital wastewater in Bangladesh.
The study identified several AMR genes in a multidrug-resistant Bacillus cereus strain isolated from hospital wastewater, including beta-lactamases (BcII, BcIII, BcI), glycopeptide resistance genes (vanW, vanY, vanT), tetracycline resistance gene (tetB(P)), fosfomycin resistance gene (fosB), and efflux pump genes (bcrA, bcrB, ykkCD, qacJ).
Metagenomics reveals fibre fermentation and AMR pathways in red grouse (Lagopus scotica) microbiota.
The study identified multiple vancomycin resistance genes, including vanW, vanG, vanT, vanY, vanXY, vanH, and others, in the caecal microbiota of red grouse. Additionally, a tetracycline resistance gene (adeF) and a metronidazole resistance gene (nimJ) were detected.
Unveiling community structure, antimicrobial resistance, and virulence factor of a wastewater sample of dairy farm located in mayurbhanj, odisha, india.
The study identified several antimicrobial resistance (AMR) genes in a dairy wastewater sample, including beta-lactamases, aminoglycoside acetyltransferases, tetracycline resistance proteins, quinolone resistance proteins, and macrolide ribosome methyltransferases. These genes were found in various bacterial species such as Escherichia coli, Staphylococcus aureus, Klebsiella pneumoniae, and Pseudomonas aeruginosa.
Genomic Characterization of Pan-Drug Resistant Klebsiella pneumoniae KPNW Isolated From UTI Patient in Bangladesh.
The study identifies 42 antimicrobial resistance (AMR) genes in the pan-drug resistant Klebsiella pneumoniae isolate KPNW, including beta-lactamases (bla CTX-M-15, bla NDM-1, bla OXA-1, bla TEM-63, bla TEM-104, bla SHV-28), tetracycline resistance genes (tet(A)), and efflux pump genes (oqxA, oqxB, marA, marR, ompK37, pbp3, crp, h-ns, kpnG, kpnH, parC, rsmA). Additionally, the isolate shows resistance to polymyxin B and colistin through modifications in lipid A (eptB, arnT, lptD, msbA, vanG) and other mechanisms.
Lignocellulose degradation capabilities and distribution of antibiotic resistance genes and virulence factors in Clostridium from the gut of giant pandas.
The study identified 19 antibiotic resistance genes (ARGs) in Clostridium species from the gut of giant pandas, including glycopeptide resistance genes (vanG, vanH, vanR, vanT, vanW, vanX, vanY), tetracycline resistance genes (tet(Q), tetA(P), tetB(P)), multidrug resistance genes (cplR, sdrM, ermQ), and disinfectant resistance genes (qacG, qacJ).
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