ykkD

small multidrug resistance (SMR) antibiotic efflux pump

Validation StatusConfirmed2+ DBs

Overview

Mechanism: antibiotic efflux
Validation Method: genome-based functional predictions
Drug Classes: aminoglycosides, phenicols
Organisms: Bacillus subtilis subsp. subtilis str. 168, Dysgonomonas mossii
Geographic Location: China
Papers: 1
Databases: Card DatabaseReslit

Papers1

Gene Information

Gene Name: ykkD
Allele: ykkD
Encodes: small multidrug resistance (SMR) antibiotic efflux pump
Source Database: Card Database
Mechanism: antibiotic efflux
Organisms Tested In: • Bacillus subtilis subsp. subtilis str. 168
Sequence Accession: AL009126.1
Protein Accession: CAB13167.1
Notes: ARO:3003064

Dysgonomonas mossii Strain Shenzhen WH 0221, a New Member of the Genus Dysgonomonas Isolated from the Blood of a Patient with Diabetic Nephropathy, Exhibits Multiple Antibiotic Resistance.

PMID 35913210 · 2022

The study identifies Dysgonomonas mossii strain Shenzhen WH 0221, which exhibits resistance to multiple antibiotics, including cephalosporins, aminoglycosides, beta-lactams, fluoroquinolones, glycopeptides, and phenicols. The resistance is attributed to genes such as kdpE, ykkD, cmeB, TLA-3, and vanRM.

Gene Information

Gene Name: ykkD
Allele: ykkD
Encodes: efflux pump protein
Source Database: Reslit
Confers Resistance To: aminoglycosidesphenicols
Organisms Tested In: • Dysgonomonas mossii
Geographic Location: China
Validation Method: genome-based functional predictions
Sequence Accession: JAMWSN000000000|SRR19882120|OK254132

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ykkD

small multidrug resistance (SMR) antibiotic efflux pump

NCBI Pathogen Isolates

Bacterial genomes carrying this gene

NCBI Reference Gene Catalog

Known alleles and reference sequences

UniProt

Protein entries specific to ykkD

AMR Rules

Browse AMR rules for ykkD

Validation StatusConfirmed2+ DBs

Overview

Mechanism: antibiotic efflux
Validation Method: genome-based functional predictions
Drug Classes: aminoglycosides, phenicols
Organisms: Bacillus subtilis subsp. subtilis str. 168, Dysgonomonas mossii
Geographic Location: China
Papers: 1
Databases: Card DatabaseReslit

Papers1

PMID N/A

Gene Information

Gene Name: ykkD
Allele: ykkD
Encodes: small multidrug resistance (SMR) antibiotic efflux pump
Source Database: Card Database
Mechanism: antibiotic efflux
Organisms Tested In: • Bacillus subtilis subsp. subtilis str. 168
Sequence Accession: AL009126.1
Protein Accession: CAB13167.1
Notes: ARO:3003064

Dysgonomonas mossii Strain Shenzhen WH 0221, a New Member of the Genus Dysgonomonas Isolated from the Blood of a Patient with Diabetic Nephropathy, Exhibits Multiple Antibiotic Resistance.

PMID 35913210 · 2022

Gene Information

Gene Name: ykkD
Allele: ykkD
Encodes: efflux pump protein
Source Database: Reslit
Confers Resistance To: aminoglycosidesphenicols
Organisms Tested In: • Dysgonomonas mossii
Geographic Location: China
Validation Method: genome-based functional predictions
Sequence Accession: JAMWSN000000000|SRR19882120|OK254132

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ykkD

Gene Information

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ykkD

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